SEARCH
JASPAR matrix models:
ID name species class family Sequence logo
MA0265.1  ABF1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0266.1  ABF2  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0267.1  ACE2  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0268.1  ADR1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0269.1  AFT1  Saccharomyces cerevisiae   Other  Other 
MA0270.1  AFT2  Saccharomyces cerevisiae   Other  Other 
MA0271.1  ARG80  Saccharomyces cerevisiae   Other Alpha-Helix  MADS 
MA0272.1  ARG81  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0273.1  ARO80  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0274.1  ARR1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0275.1  ASG1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0276.1  ASH1  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0277.1  AZF1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0278.1  BAS1  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0279.1  CAD1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0280.1  CAT8  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0281.1  CBF1  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0282.1  CEP3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0283.1  CHA4  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0284.1  CIN5  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0285.1  CRZ1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0286.1  CST6  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0287.1  CUP2  Saccharomyces cerevisiae   Zinc-coordinating  Copper fist 
MA0288.1  CUP9  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0289.1  DAL80  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0290.1  DAL81  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0291.1  DAL82  Saccharomyces cerevisiae   Other  Other 
MA0292.1  ECM22  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0293.1  ECM23  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0294.1  EDS1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0295.1  FHL1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  Forkhead 
MA0296.1  FKH1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  Forkhead 
MA0297.1  FKH2  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  Forkhead 
MA0298.1  FZF1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0299.1  GAL4  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0300.1  GAT1  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0301.1  GAT3  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0302.1  GAT4  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0303.1  GCN4  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0304.1  GCR1  Saccharomyces cerevisiae   Other  Other 
MA0305.1  GCR2  Saccharomyces cerevisiae   Other  Other 
MA0306.1  GIS1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0307.1  GLN3  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0308.1  GSM1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0309.1  GZF3  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0310.1  HAC1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0311.1  HAL9  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0312.1  HAP1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0313.1  HAP2  Saccharomyces cerevisiae   Other Alpha-Helix  NFY CCAAT-binding 
MA0314.1  HAP3  Saccharomyces cerevisiae   Other Alpha-Helix  NFY CCAAT-binding 
MA0315.1  HAP4  Saccharomyces cerevisiae   Other Alpha-Helix  NFY CCAAT-binding 
MA0316.1  HAP5  Saccharomyces cerevisiae   Other Alpha-Helix  NFY CCAAT-binding 
MA0317.1  HCM1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  Forkhead 
MA0318.1  HMRA2  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0319.1  HSF1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  E2F 
MA0320.1  IME1  Saccharomyces cerevisiae   Other  Other 
MA0321.1  INO2  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0322.1  INO4  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0323.1  IXR1  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0324.1  LEU3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0325.1  LYS14  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0326.1  MAC1  Saccharomyces cerevisiae   Zinc-coordinating  Copper fist 
MA0327.1  MATA1  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0328.1  MATALPHA2  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0329.1  MBP1  Saccharomyces cerevisiae   Ig-fold  Rel 
MA0330.1  MBP1::SWI6  Saccharomyces cerevisiae   Ig-fold  Rel 
MA0331.1  MCM1  Saccharomyces cerevisiae   Other Alpha-Helix  MADS 
MA0332.1  MET28  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0333.1  MET31  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0334.1  MET32  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0335.1  MET4  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0336.1  MGA1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  E2F 
MA0337.1  MIG1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0338.1  MIG2  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0339.1  MIG3  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0340.1  MOT3  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0341.1  MSN2  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0342.1  MSN4  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0343.1  NDT80  Saccharomyces cerevisiae   Ig-fold  NDT80/PhoG 
MA0344.1  NHP10  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0345.1  NHP6A  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0346.1  NHP6B  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0347.1  NRG1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0348.1  OAF1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0349.1  OPI1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0350.1  TOD6  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0351.1  DOT6  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0352.1  PDR1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0353.1  PDR3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0354.1  PDR8  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0355.1  PHD1  Saccharomyces cerevisiae   Other  KilA-N 
MA0356.1  PHO2  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0357.1  PHO4  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0358.1  PUT3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0359.1  RAP1  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0360.1  RDR1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0361.1  RDS1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0362.1  RDS2  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0363.1  REB1  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0364.1  REI1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0365.1  RFX1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  RFX 
MA0366.1  RGM1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0367.1  RGT1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0368.1  RIM101  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0369.1  RLM1  Saccharomyces cerevisiae   Other Alpha-Helix  MADS 
MA0370.1  RME1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0371.1  ROX1  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0372.1  RPH1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0373.1  RPN4  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0374.1  RSC3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0375.1  RSC30  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0376.1  RTG3  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0377.1  SFL1  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  E2F 
MA0378.1  SFP1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0379.1  SIG1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0380.1  SIP4  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0381.1  SKN7  Saccharomyces cerevisiae   Winged Helix-Turn-Helix  E2F 
MA0382.1  SKO1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0383.1  SMP1  Saccharomyces cerevisiae   Other Alpha-Helix  MADS 
MA0384.1  SNT2  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0385.1  SOK2  Saccharomyces cerevisiae   Other  KilA-N 
MA0386.1  TBP  Saccharomyces cerevisiae   Beta-sheet  TATA-binding 
MA0387.1  SPT2  Saccharomyces cerevisiae   Other Alpha-Helix  High Mobility Group box (HMG) 
MA0388.1  SPT23  Saccharomyces cerevisiae   Other  Other 
MA0389.1  SRD1  Saccharomyces cerevisiae   Zinc-coordinating  GATA 
MA0390.1  STB3  Saccharomyces cerevisiae   Other  Other 
MA0391.1  STB4  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0392.1  STB5  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0393.1  STE12  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0394.1  STP1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0395.1  STP2  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0396.1  STP3  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0397.1  STP4  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0398.1  SUM1  Saccharomyces cerevisiae   Other  AT-hook 
MA0399.1  SUT1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0400.1  SUT2  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0401.1  SWI4  Saccharomyces cerevisiae   Ig-fold  Rel 
MA0402.1  SWI5  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0403.1  TBF1  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0404.1  TBS1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0405.1  TEA1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0406.1  TEC1  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0407.1  THI2  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0408.1  TOS8  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0409.1  TYE7  Saccharomyces cerevisiae   Zipper-Type  Helix-Loop-Helix 
MA0410.1  UGA3  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0411.1  UPC2  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0412.1  UME6  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0413.1  USV1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0414.1  XBP1  Saccharomyces cerevisiae   Ig-fold  Rel 
MA0415.1  YAP1  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0416.1  YAP3  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0417.1  YAP5  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0418.1  YAP6  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0419.1  YAP7  Saccharomyces cerevisiae   Zipper-Type  Leucine Zipper 
MA0420.1  YBR239C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0421.1  YDR026C  Saccharomyces cerevisiae   Helix-Turn-Helix  Myb 
MA0422.1  YDR520C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0423.1  YER130C  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0424.1  YER184C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0425.1  YGR067C  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0426.1  YHP1  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0427.1  YJL103C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0428.1  YKL222C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0429.1  YLL054C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0430.1  YLR278C  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0431.1  YML081W  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0432.1  YNR063W  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0433.1  YOX1  Saccharomyces cerevisiae   Helix-Turn-Helix  Homeo 
MA0434.1  YPR013C  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0435.1  YPR015C  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0436.1  YPR022C  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0437.1  YPR196W  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0438.1  YRM1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0439.1  YRR1  Saccharomyces cerevisiae   Zinc-coordinating  Fungal Zn cluster 
MA0440.1  ZAP1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
MA0441.1  ZMS1  Saccharomyces cerevisiae   Zinc-coordinating  BetaBetaAlpha-zinc finger 
 
ANALYZE selected matrix models:
selected models using STAMP
Create RANDOM matrix models based on selected models
Number of matrices:    Format:
Create models with PERMUTED columns from selected:
Type: Format:
SCAN this (fasta-formatted) sequence with selected matrix models
Relative profile score threshold   %